athenahealth vs Practice Fusion
Side-by-side from the Top 11 rankings of The 11 Best EHR Software for Medical Practices and The 11 Best Medical Billing Software. Last verified June 15, 2026.
The short answer
athenahealth ranks higher on Top 11 (#1 vs #9) for Physicians and practice managers choosing an electronic health records system / Medical practices managing billing and revenue cycle. Best for network intelligence and cloud-based revenue cycle management in ambulatory settings.
At a glance
| athenahealth | Practice Fusion | |
|---|---|---|
| Top 11 rank | #1 / The 11 Best EHR Software for Medical Practices | #9 / The 11 Best Medical Billing Software |
| Score (out of 9.4) | 9.3 | 7.5 |
| Best for | Networked, cloud-based practices | Simple EHR with basic billing |
| Pricing | $$$$ ($500 to $900/mo/provider) | $$ ($149/mo/provider) |
| HQ | Watertown, MA, USA | San Francisco, CA, USA |
| Founded | 1997 | 2005 |
athenahealth
Best for network intelligence and cloud-based revenue cycle management in ambulatory settings.
www.athenahealth.comSee full entry in The 11 Best EHR Software for Medical Practices
Practice Fusion
A simple, affordable EHR with adequate integrated billing for small clinics.
www.practicefusion.comMethodology and scoring weights live at /methodology. No vendor pays for placement — see about.